Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 GSN-AS1-201ENST00000414544 4763 ntBASIC6.99□□□□□ -1.29
HTTP42858 ABCC12-201ENST00000311303 5168 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HTTP42858 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HTTP42858 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
HTTP42858 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
HTTP42858 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC6.99□□□□□ -1.29
HTTP42858 AC241584.2-201ENST00000637142 2090 ntBASIC6.99□□□□□ -1.29
HTTP42858 AC026464.2-201ENST00000567834 2421 ntBASIC6.99□□□□□ -1.29
HTTP42858 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
HTTP42858 RNA5SP228-201ENST00000516232 133 ntBASIC6.98□□□□□ -1.29
HTTP42858 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.98□□□□□ -1.29
HTTP42858 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 ATXN7L3B-201ENST00000519948 7604 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
HTTP42858 PDZK1P1-202ENST00000425209 1350 ntBASIC6.98□□□□□ -1.29
HTTP42858 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
HTTP42858 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
HTTP42858 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
HTTP42858 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.98□□□□□ -1.29
HTTP42858 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC6.98□□□□□ -1.29
HTTP42858 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
HTTP42858 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.98□□□□□ -1.29
HTTP42858 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 RPL34P3-201ENST00000421454 338 ntBASIC6.98□□□□□ -1.29
HTTP42858 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.98□□□□□ -1.29
HTTP42858 AC024558.1-201ENST00000505008 528 ntBASIC6.98□□□□□ -1.29
HTTP42858 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.98□□□□□ -1.29
HTTP42858 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 AC018552.1-201ENST00000562099 811 ntBASIC6.98□□□□□ -1.29
HTTP42858 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
HTTP42858 MRPS5P4-201ENST00000592830 325 ntBASIC6.98□□□□□ -1.29
HTTP42858 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 RPSAP73-201ENST00000614820 330 ntBASIC6.98□□□□□ -1.29
HTTP42858 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.98□□□□□ -1.29
HTTP42858 AC027088.4-201ENST00000611559 1947 ntBASIC6.98□□□□□ -1.29
HTTP42858 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 AC092111.1-201ENST00000618256 3358 ntBASIC6.98□□□□□ -1.29
HTTP42858 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 LRRC37A3-211ENST00000584306 5665 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 AL049634.1-201ENST00000453770 1720 ntBASIC6.98□□□□□ -1.29
HTTP42858 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 CCPG1-201ENST00000310958 6822 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 LAMA4-205ENST00000389463 6297 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 RPA2P2-201ENST00000419698 796 ntBASIC6.98□□□□□ -1.29
HTTP42858 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 AC245884.2-201ENST00000426257 404 ntBASIC6.98□□□□□ -1.29
HTTP42858 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.98□□□□□ -1.29
HTTP42858 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 FKBP1AP1-201ENST00000594588 318 ntBASIC6.98□□□□□ -1.29
HTTP42858 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 RBMY1HP-201ENST00000382759 1389 ntBASIC6.98□□□□□ -1.29
HTTP42858 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HTTP42858 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
HTTP42858 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 AC007842.1-201ENST00000597336 2039 ntBASIC6.97□□□□□ -1.29
HTTP42858 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 CNOT7P2-201ENST00000441051 832 ntBASIC6.97□□□□□ -1.29
HTTP42858 AC090958.1-201ENST00000511122 351 ntBASIC6.97□□□□□ -1.29
HTTP42858 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HTTP42858 MIR4776-2-201ENST00000580204 80 ntBASIC6.97□□□□□ -1.29
HTTP42858 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.97□□□□□ -1.29
HTTP42858 TMEM51-AS1-201ENST00000310916 7100 ntTSL 2 BASIC6.97□□□□□ -1.29
HTTP42858 AC011416.1-201ENST00000514947 1732 ntBASIC6.97□□□□□ -1.29
HTTP42858 DEPDC5-201ENST00000382111 5212 ntTSL 5 BASIC6.97□□□□□ -1.29
HTTP42858 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.97□□□□□ -1.29
HTTP42858 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 AL139384.2-201ENST00000613809 3590 ntBASIC6.97□□□□□ -1.29
HTTP42858 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
HTTP42858 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HTTP42858 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HTTP42858 AL049697.3-201ENST00000406493 982 ntBASIC6.97□□□□□ -1.29
HTTP42858 AL390119.1-201ENST00000440329 312 ntBASIC6.97□□□□□ -1.29
HTTP42858 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.97□□□□□ -1.29
HTTP42858 FTLP8-201ENST00000446770 267 ntBASIC6.97□□□□□ -1.29
HTTP42858 CBX1P5-201ENST00000475330 559 ntBASIC6.97□□□□□ -1.29
HTTP42858 RPL23AP68-201ENST00000480924 445 ntBASIC6.97□□□□□ -1.29
HTTP42858 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.97□□□□□ -1.29
HTTP42858 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.97□□□□□ -1.29
HTTP42858 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.97□□□□□ -1.29
HTTP42858 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms