Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
COL15A1P39059 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC8.48□□□□□ -1.05
COL15A1P39059 AC002127.1-201ENST00000421305 225 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC8.48□□□□□ -1.05
COL15A1P39059 AC091390.2-201ENST00000432573 374 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC8.48□□□□□ -1.05
COL15A1P39059 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC8.48□□□□□ -1.05
COL15A1P39059 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8.48□□□□□ -1.05
COL15A1P39059 RPL5P11-201ENST00000498068 893 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC8.48□□□□□ -1.05
COL15A1P39059 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC8.48□□□□□ -1.05
COL15A1P39059 TBCA-209ENST00000522370 435 ntTSL 3 BASIC8.48□□□□□ -1.05
COL15A1P39059 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.48□□□□□ -1.05
COL15A1P39059 RN7SL753P-201ENST00000581238 290 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 AC137695.1-201ENST00000604126 489 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 MIR6862-1-201ENST00000613016 70 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 MIR6862-2-201ENST00000614755 70 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.48□□□□□ -1.05
COL15A1P39059 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.48□□□□□ -1.05
COL15A1P39059 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC8.48□□□□□ -1.05
COL15A1P39059 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC8.48□□□□□ -1.05
COL15A1P39059 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.47□□□□□ -1.05
COL15A1P39059 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
COL15A1P39059 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC8.47□□□□□ -1.05
COL15A1P39059 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.47□□□□□ -1.05
COL15A1P39059 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
COL15A1P39059 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
COL15A1P39059 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
COL15A1P39059 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
COL15A1P39059 RN7SKP275-201ENST00000364626 301 ntBASIC8.47□□□□□ -1.05
COL15A1P39059 SNORA77.2-201ENST00000408571 112 ntBASIC8.47□□□□□ -1.05
COL15A1P39059 AL929472.1-201ENST00000417484 429 ntBASIC8.47□□□□□ -1.05
COL15A1P39059 RPS7P12-201ENST00000422385 582 ntBASIC8.47□□□□□ -1.05
COL15A1P39059 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC8.47□□□□□ -1.05
COL15A1P39059 AC069154.1-201ENST00000432914 542 ntBASIC8.47□□□□□ -1.05
COL15A1P39059 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC8.47□□□□□ -1.05
COL15A1P39059 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC8.47□□□□□ -1.05
COL15A1P39059 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.47□□□□□ -1.05
COL15A1P39059 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.47□□□□□ -1.05
COL15A1P39059 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC8.47□□□□□ -1.05
COL15A1P39059 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC8.47□□□□□ -1.05
COL15A1P39059 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC8.47□□□□□ -1.05
COL15A1P39059 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.47□□□□□ -1.05
COL15A1P39059 AL365181.4-201ENST00000609800 547 ntBASIC8.47□□□□□ -1.05
COL15A1P39059 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
COL15A1P39059 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
COL15A1P39059 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.05
COL15A1P39059 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC8.46□□□□□ -1.05
COL15A1P39059 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
COL15A1P39059 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
COL15A1P39059 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.46□□□□□ -1.05
COL15A1P39059 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.46□□□□□ -1.05
COL15A1P39059 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
COL15A1P39059 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC8.46□□□□□ -1.06
COL15A1P39059 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC8.46□□□□□ -1.06
COL15A1P39059 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.46□□□□□ -1.06
COL15A1P39059 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
COL15A1P39059 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
COL15A1P39059 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
COL15A1P39059 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
COL15A1P39059 RPA3-204ENST00000406109 434 ntTSL 3 BASIC8.46□□□□□ -1.06
COL15A1P39059 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
COL15A1P39059 RPS29P14-201ENST00000431518 171 ntBASIC8.46□□□□□ -1.06
COL15A1P39059 GTF3AP6-201ENST00000432585 986 ntBASIC8.46□□□□□ -1.06
COL15A1P39059 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC8.46□□□□□ -1.06
COL15A1P39059 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.46□□□□□ -1.06
COL15A1P39059 AC094085.1-201ENST00000468914 584 ntBASIC8.46□□□□□ -1.06
COL15A1P39059 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.46□□□□□ -1.06
COL15A1P39059 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.46□□□□□ -1.06
COL15A1P39059 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC8.46□□□□□ -1.06
COL15A1P39059 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.46□□□□□ -1.06
COL15A1P39059 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC8.46□□□□□ -1.06
COL15A1P39059 AC124916.2-201ENST00000604416 224 ntBASIC8.46□□□□□ -1.06
COL15A1P39059 AL357140.4-201ENST00000636827 412 ntBASIC8.46□□□□□ -1.06
COL15A1P39059 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
COL15A1P39059 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
COL15A1P39059 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.46□□□□□ -1.06
COL15A1P39059 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.45□□□□□ -1.06
COL15A1P39059 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
COL15A1P39059 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
COL15A1P39059 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC8.45□□□□□ -1.06
COL15A1P39059 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms