Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC027575.3-201ENST00000583058 2747 ntBASIC9.34□□□□□ -0.91
CPS1P31327 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC9.34□□□□□ -0.91
CPS1P31327 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC9.34□□□□□ -0.91
CPS1P31327 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC9.34□□□□□ -0.91
CPS1P31327 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CPS1P31327 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC9.33□□□□□ -0.92
CPS1P31327 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CPS1P31327 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC9.33□□□□□ -0.92
CPS1P31327 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CPS1P31327 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
CPS1P31327 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC9.33□□□□□ -0.92
CPS1P31327 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC9.33□□□□□ -0.92
CPS1P31327 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CPS1P31327 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CPS1P31327 AC010547.6-201ENST00000571789 193 ntBASIC9.33□□□□□ -0.92
CPS1P31327 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
CPS1P31327 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC9.33□□□□□ -0.92
CPS1P31327 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC9.33□□□□□ -0.92
CPS1P31327 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC9.33□□□□□ -0.92
CPS1P31327 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CPS1P31327 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CPS1P31327 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CPS1P31327 AC015871.4-201ENST00000624650 2260 ntBASIC9.33□□□□□ -0.92
CPS1P31327 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC9.33□□□□□ -0.92
CPS1P31327 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CPS1P31327 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CPS1P31327 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC9.33□□□□□ -0.92
CPS1P31327 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CPS1P31327 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC9.33□□□□□ -0.92
CPS1P31327 CASC19-238ENST00000641523 1558 ntBASIC9.33□□□□□ -0.92
CPS1P31327 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
CPS1P31327 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC9.32□□□□□ -0.92
CPS1P31327 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CPS1P31327 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CPS1P31327 RN7SKP296-201ENST00000411185 341 ntBASIC9.32□□□□□ -0.92
CPS1P31327 Y_RNA.625-201ENST00000411256 107 ntBASIC9.32□□□□□ -0.92
CPS1P31327 RN7SKP293-201ENST00000411389 296 ntBASIC9.32□□□□□ -0.92
CPS1P31327 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC9.32□□□□□ -0.92
CPS1P31327 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC9.32□□□□□ -0.92
CPS1P31327 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC9.32□□□□□ -0.92
CPS1P31327 AC231760.1-201ENST00000498002 260 ntBASIC9.32□□□□□ -0.92
CPS1P31327 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC9.32□□□□□ -0.92
CPS1P31327 OR5H7P-201ENST00000514084 930 ntBASIC9.32□□□□□ -0.92
CPS1P31327 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC9.32□□□□□ -0.92
CPS1P31327 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC9.32□□□□□ -0.92
CPS1P31327 SNORD95-201ENST00000579879 68 ntBASIC9.32□□□□□ -0.92
CPS1P31327 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC9.32□□□□□ -0.92
CPS1P31327 SAMMSON-214ENST00000641395 1264 ntBASIC9.32□□□□□ -0.92
CPS1P31327 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CPS1P31327 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC9.32□□□□□ -0.92
CPS1P31327 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC9.32□□□□□ -0.92
CPS1P31327 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC9.32□□□□□ -0.92
CPS1P31327 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC9.32□□□□□ -0.92
CPS1P31327 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC9.32□□□□□ -0.92
CPS1P31327 OR13C1P-202ENST00000641378 2919 ntBASIC9.32□□□□□ -0.92
CPS1P31327 Z99129.4-201ENST00000624649 2435 ntBASIC9.31□□□□□ -0.92
CPS1P31327 SNORA74A-201ENST00000364089 198 ntBASIC9.31□□□□□ -0.92
CPS1P31327 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
CPS1P31327 CYCSP17-201ENST00000407870 315 ntBASIC9.31□□□□□ -0.92
CPS1P31327 SULT1D1P-201ENST00000458020 882 ntBASIC9.31□□□□□ -0.92
CPS1P31327 RPL32P9-201ENST00000487963 407 ntBASIC9.31□□□□□ -0.92
CPS1P31327 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC9.31□□□□□ -0.92
CPS1P31327 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC9.31□□□□□ -0.92
CPS1P31327 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC9.31□□□□□ -0.92
CPS1P31327 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC9.31□□□□□ -0.92
CPS1P31327 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC9.31□□□□□ -0.92
CPS1P31327 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC9.31□□□□□ -0.92
CPS1P31327 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC9.31□□□□□ -0.92
CPS1P31327 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC9.31□□□□□ -0.92
CPS1P31327 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
CPS1P31327 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
CPS1P31327 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
CPS1P31327 LINC01963-201ENST00000562038 3148 ntBASIC9.31□□□□□ -0.92
CPS1P31327 MELK-211ENST00000545008 2236 ntTSL 2 BASIC9.31□□□□□ -0.92
CPS1P31327 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC9.31□□□□□ -0.92
CPS1P31327 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC9.31□□□□□ -0.92
CPS1P31327 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC9.31□□□□□ -0.92
CPS1P31327 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
CPS1P31327 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CPS1P31327 RNA5SP273-201ENST00000362484 113 ntBASIC9.31□□□□□ -0.92
CPS1P31327 RN7SKP271-201ENST00000410528 320 ntBASIC9.31□□□□□ -0.92
CPS1P31327 AL359092.1-201ENST00000417156 265 ntBASIC9.31□□□□□ -0.92
CPS1P31327 AL590004.3-202ENST00000445883 451 ntBASIC9.31□□□□□ -0.92
CPS1P31327 AC133965.1-201ENST00000452984 354 ntBASIC9.31□□□□□ -0.92
CPS1P31327 RN7SL610P-201ENST00000463845 291 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms