Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.5■□□□□ 0.71
CSNK1G3Q9Y6M4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 AC097493.4-201ENST00000641197 219 ntBASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CSNK1G3Q9Y6M4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 AC012306.2-201ENST00000609350 630 ntBASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 AC133561.5-201ENST00000635547 218 ntBASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 KRT8P17-201ENST00000453110 1448 ntBASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.48■□□□□ 0.71
CSNK1G3Q9Y6M4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CSNK1G3Q9Y6M4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 FEM1AP4-201ENST00000443167 1987 ntBASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 FAM197Y1-201ENST00000421178 764 ntBASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 AP002982.1-201ENST00000492365 877 ntBASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CSNK1G3Q9Y6M4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CSNK1G3Q9Y6M4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CSNK1G3Q9Y6M4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms