Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 AC133561.1-201ENST00000568600 2415 ntBASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SCN10AQ9Y5Y9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCN10AQ9Y5Y9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.91■■□□□ 1.1
SCN10AQ9Y5Y9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.91■■□□□ 1.1
SCN10AQ9Y5Y9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCN10AQ9Y5Y9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.91■■□□□ 1.1
SCN10AQ9Y5Y9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SCN10AQ9Y5Y9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SCN10AQ9Y5Y9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SCN10AQ9Y5Y9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 NTF6B-201ENST00000591913 560 ntBASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCN10AQ9Y5Y9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SCN10AQ9Y5Y9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SCN10AQ9Y5Y9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SCN10AQ9Y5Y9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SCN10AQ9Y5Y9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 AC004980.1-204ENST00000429707 299 ntBASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCN10AQ9Y5Y9 ARMC10P1-201ENST00000313754 855 ntBASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 ECEL1P2-202ENST00000465689 757 ntBASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 PHGDH-210ENST00000641115 1638 ntBASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SCN10AQ9Y5Y9 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 TSPY14P-201ENST00000303979 915 ntBASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 AC097488.1-201ENST00000507834 756 ntBASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 AC006011.2-201ENST00000621313 1158 ntBASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 AL590326.2-201ENST00000625139 305 ntBASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.87■■□□□ 1.09
SCN10AQ9Y5Y9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms