Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MIR1238-201ENST00000408483 83 ntBASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 AP005242.2-201ENST00000580065 1175 ntBASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 AC010947.1-201ENST00000623454 693 ntBASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SHANK2Q9UPX8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 AC004980.1-204ENST00000429707 299 ntBASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 B3GAT3P1-201ENST00000471720 806 ntBASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 AL031985.4-201ENST00000642138 673 ntBASIC29.74■■■□□ 2.35
SHANK2Q9UPX8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
SHANK2Q9UPX8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC29.73■■■□□ 2.35
SHANK2Q9UPX8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
SHANK2Q9UPX8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC29.73■■■□□ 2.35
SHANK2Q9UPX8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
SHANK2Q9UPX8 DUT-205ENST00000558813 769 ntTSL 2 BASIC29.73■■■□□ 2.35
SHANK2Q9UPX8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SHANK2Q9UPX8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SHANK2Q9UPX8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SHANK2Q9UPX8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 CYP2D8P-201ENST00000433633 1490 ntBASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 GOLGA6L3-201ENST00000507199 1679 ntBASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
SHANK2Q9UPX8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC29.71■■■□□ 2.35
SHANK2Q9UPX8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC29.7■■■□□ 2.35
SHANK2Q9UPX8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
SHANK2Q9UPX8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
SHANK2Q9UPX8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC29.7■■■□□ 2.35
SHANK2Q9UPX8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC29.7■■■□□ 2.35
SHANK2Q9UPX8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC29.7■■■□□ 2.35
SHANK2Q9UPX8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC29.7■■■□□ 2.35
SHANK2Q9UPX8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
SHANK2Q9UPX8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC29.7■■■□□ 2.34
SHANK2Q9UPX8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC29.7■■■□□ 2.34
SHANK2Q9UPX8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC29.7■■■□□ 2.34
SHANK2Q9UPX8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC29.69■■■□□ 2.34
SHANK2Q9UPX8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC29.69■■■□□ 2.34
SHANK2Q9UPX8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC29.69■■■□□ 2.34
SHANK2Q9UPX8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
SHANK2Q9UPX8 BX119927.1-201ENST00000636596 1552 ntBASIC29.69■■■□□ 2.34
SHANK2Q9UPX8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SHANK2Q9UPX8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 TERF1P1-201ENST00000311003 1181 ntBASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 NME3-204ENST00000563498 920 ntTSL 2 BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SHANK2Q9UPX8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC29.68■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms