Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 PTBP1P-201ENST00000554374 1601 ntBASIC17.69■□□□□ 0.42
COPS3Q9UNS2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 AC016405.3-201ENST00000607710 860 ntBASIC17.69■□□□□ 0.42
COPS3Q9UNS2 AC010536.3-201ENST00000620306 533 ntBASIC17.69■□□□□ 0.42
COPS3Q9UNS2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COPS3Q9UNS2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 AL591742.1-201ENST00000604433 565 ntBASIC17.68■□□□□ 0.42
COPS3Q9UNS2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS3Q9UNS2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.67■□□□□ 0.42
COPS3Q9UNS2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS3Q9UNS2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.65■□□□□ 0.42
COPS3Q9UNS2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms