Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC092437.1-201ENST00000624794 1048 ntBASIC18.52■□□□□ 0.56
RLIMQ9NVW2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
RLIMQ9NVW2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RLIMQ9NVW2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 BX119927.1-201ENST00000636596 1552 ntBASIC18.51■□□□□ 0.55
RLIMQ9NVW2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 MIR935-201ENST00000401179 91 ntBASIC18.51■□□□□ 0.55
RLIMQ9NVW2 AL355472.2-201ENST00000422958 438 ntBASIC18.51■□□□□ 0.55
RLIMQ9NVW2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 AC069236.1-201ENST00000604339 616 ntBASIC18.51■□□□□ 0.55
RLIMQ9NVW2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RLIMQ9NVW2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 KRT18P68-201ENST00000392293 1000 ntBASIC18.5■□□□□ 0.55
RLIMQ9NVW2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
RLIMQ9NVW2 TMEM179-206ENST00000616017 1645 ntBASIC18.49■□□□□ 0.55
RLIMQ9NVW2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 AC005332.7-201ENST00000614046 2005 ntBASIC18.49■□□□□ 0.55
RLIMQ9NVW2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 AC008694.1-202ENST00000636953 945 ntBASIC18.49■□□□□ 0.55
RLIMQ9NVW2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 PTBP1P-201ENST00000554374 1601 ntBASIC18.49■□□□□ 0.55
RLIMQ9NVW2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RLIMQ9NVW2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RLIMQ9NVW2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.48■□□□□ 0.55
RLIMQ9NVW2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.48■□□□□ 0.55
RLIMQ9NVW2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RLIMQ9NVW2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.48■□□□□ 0.55
RLIMQ9NVW2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RLIMQ9NVW2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RLIMQ9NVW2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RLIMQ9NVW2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
RLIMQ9NVW2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.48■□□□□ 0.55
RLIMQ9NVW2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
RLIMQ9NVW2 CYP2T3P-201ENST00000601990 817 ntBASIC18.48■□□□□ 0.55
RLIMQ9NVW2 AC093484.2-201ENST00000580996 2166 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms