Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2LQ9NUG4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 AC004854.2-201ENST00000608450 1441 ntBASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCM2LQ9NUG4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 TSPY20P-201ENST00000450910 630 ntBASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 AC116050.2-201ENST00000612102 1779 ntBASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 AC008175.2-201ENST00000612840 297 ntBASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CCM2LQ9NUG4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 GPX1P1-201ENST00000388829 606 ntBASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCM2LQ9NUG4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 MIR663A-201ENST00000385250 93 ntBASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 TPRG1LP1-201ENST00000598702 760 ntBASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.85■□□□□ 0.61
CCM2LQ9NUG4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms