Protein–RNA interactions for Protein: Q9NR55

BATF3, Basic leucine zipper transcriptional factor ATF-like 3, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BATF3Q9NR55 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BATF3Q9NR55 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BATF3Q9NR55 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
BATF3Q9NR55 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BATF3Q9NR55 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BATF3Q9NR55 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.64■□□□□ 0.57
BATF3Q9NR55 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.64■□□□□ 0.57
BATF3Q9NR55 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BATF3Q9NR55 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BATF3Q9NR55 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BATF3Q9NR55 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BATF3Q9NR55 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.64■□□□□ 0.57
BATF3Q9NR55 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
BATF3Q9NR55 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BATF3Q9NR55 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BATF3Q9NR55 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BATF3Q9NR55 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BATF3Q9NR55 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BATF3Q9NR55 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BATF3Q9NR55 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BATF3Q9NR55 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BATF3Q9NR55 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BATF3Q9NR55 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.63■□□□□ 0.57
BATF3Q9NR55 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BATF3Q9NR55 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.63■□□□□ 0.57
BATF3Q9NR55 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.63■□□□□ 0.57
BATF3Q9NR55 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BATF3Q9NR55 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BATF3Q9NR55 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BATF3Q9NR55 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BATF3Q9NR55 MST1L-201ENST00000442552 2185 ntBASIC18.62■□□□□ 0.57
BATF3Q9NR55 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
BATF3Q9NR55 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.62■□□□□ 0.57
BATF3Q9NR55 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BATF3Q9NR55 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
BATF3Q9NR55 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.62■□□□□ 0.57
BATF3Q9NR55 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BATF3Q9NR55 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
BATF3Q9NR55 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BATF3Q9NR55 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BATF3Q9NR55 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BATF3Q9NR55 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
BATF3Q9NR55 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BATF3Q9NR55 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BATF3Q9NR55 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BATF3Q9NR55 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.62■□□□□ 0.57
BATF3Q9NR55 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BATF3Q9NR55 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BATF3Q9NR55 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BATF3Q9NR55 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.62■□□□□ 0.57
BATF3Q9NR55 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.62■□□□□ 0.57
BATF3Q9NR55 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.62■□□□□ 0.57
BATF3Q9NR55 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BATF3Q9NR55 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BATF3Q9NR55 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BATF3Q9NR55 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BATF3Q9NR55 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BATF3Q9NR55 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BATF3Q9NR55 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.61■□□□□ 0.57
BATF3Q9NR55 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BATF3Q9NR55 AC087741.3-201ENST00000624270 1347 ntBASIC18.61■□□□□ 0.57
BATF3Q9NR55 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.61■□□□□ 0.57
BATF3Q9NR55 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.61■□□□□ 0.57
BATF3Q9NR55 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
BATF3Q9NR55 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BATF3Q9NR55 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
BATF3Q9NR55 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
BATF3Q9NR55 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.61■□□□□ 0.57
BATF3Q9NR55 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BATF3Q9NR55 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.61■□□□□ 0.57
BATF3Q9NR55 AC011484.1-201ENST00000377652 1995 ntBASIC18.61■□□□□ 0.57
BATF3Q9NR55 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
BATF3Q9NR55 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
BATF3Q9NR55 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
BATF3Q9NR55 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms