Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.96■□□□□ 0.95
GDF3Q9NR23 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
GDF3Q9NR23 AC120498.10-201ENST00000621827 505 ntBASIC20.96■□□□□ 0.95
GDF3Q9NR23 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.96■□□□□ 0.95
GDF3Q9NR23 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF3Q9NR23 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF3Q9NR23 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF3Q9NR23 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.96■□□□□ 0.95
GDF3Q9NR23 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF3Q9NR23 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.96■□□□□ 0.95
GDF3Q9NR23 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.96■□□□□ 0.95
GDF3Q9NR23 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.95■□□□□ 0.94
GDF3Q9NR23 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.95■□□□□ 0.94
GDF3Q9NR23 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
GDF3Q9NR23 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
GDF3Q9NR23 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF3Q9NR23 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GDF3Q9NR23 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GDF3Q9NR23 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
GDF3Q9NR23 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GDF3Q9NR23 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GDF3Q9NR23 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GDF3Q9NR23 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 CYP2T1P-201ENST00000432607 1285 ntBASIC20.94■□□□□ 0.94
GDF3Q9NR23 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 AC007322.4-201ENST00000509611 723 ntBASIC20.94■□□□□ 0.94
GDF3Q9NR23 AC008175.2-201ENST00000612840 297 ntBASIC20.94■□□□□ 0.94
GDF3Q9NR23 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GDF3Q9NR23 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GDF3Q9NR23 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GDF3Q9NR23 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GDF3Q9NR23 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
GDF3Q9NR23 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GDF3Q9NR23 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDF3Q9NR23 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.93■□□□□ 0.94
GDF3Q9NR23 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.93■□□□□ 0.94
GDF3Q9NR23 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDF3Q9NR23 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.93■□□□□ 0.94
GDF3Q9NR23 MIR4758-201ENST00000577688 71 ntBASIC20.93■□□□□ 0.94
GDF3Q9NR23 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.93■□□□□ 0.94
GDF3Q9NR23 AC008694.1-202ENST00000636953 945 ntBASIC20.93■□□□□ 0.94
GDF3Q9NR23 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GDF3Q9NR23 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDF3Q9NR23 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDF3Q9NR23 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
GDF3Q9NR23 AC068338.2-201ENST00000563278 1430 ntBASIC20.93■□□□□ 0.94
GDF3Q9NR23 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDF3Q9NR23 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDF3Q9NR23 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
GDF3Q9NR23 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GDF3Q9NR23 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDF3Q9NR23 BX119927.1-201ENST00000636596 1552 ntBASIC20.93■□□□□ 0.94
GDF3Q9NR23 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDF3Q9NR23 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.93■□□□□ 0.94
GDF3Q9NR23 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GDF3Q9NR23 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GDF3Q9NR23 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GDF3Q9NR23 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GDF3Q9NR23 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GDF3Q9NR23 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GDF3Q9NR23 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.92■□□□□ 0.94
GDF3Q9NR23 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.92■□□□□ 0.94
GDF3Q9NR23 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GDF3Q9NR23 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
GDF3Q9NR23 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GDF3Q9NR23 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GDF3Q9NR23 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GDF3Q9NR23 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GDF3Q9NR23 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF3Q9NR23 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF3Q9NR23 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
GDF3Q9NR23 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF3Q9NR23 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF3Q9NR23 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF3Q9NR23 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms