Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.8■□□□□ 0.6
PRDM9Q9NQV7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 TMEM179-206ENST00000616017 1645 ntBASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRDM9Q9NQV7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 AC009237.14-201ENST00000609975 1594 ntBASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 KRT17P3-201ENST00000420566 1262 ntBASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 AC006058.3-201ENST00000606217 1069 ntBASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 AC120498.8-201ENST00000614275 531 ntBASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRDM9Q9NQV7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 AP001271.2-201ENST00000624018 1556 ntBASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 POM121L13P-201ENST00000422362 380 ntBASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 ITM2C-210ENST00000620962 501 ntBASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PRDM9Q9NQV7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRDM9Q9NQV7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
PRDM9Q9NQV7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PRDM9Q9NQV7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.76■□□□□ 0.59
PRDM9Q9NQV7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms