Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 TSPY26P-201ENST00000476365 1326 ntBASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SND1-IT1Q9HBX3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 AC024257.2-201ENST00000549699 147 ntBASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 AL136162.1-201ENST00000607711 1078 ntBASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 AC008175.2-201ENST00000612840 297 ntBASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SND1-IT1Q9HBX3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 POU5F1P4-201ENST00000413175 1085 ntBASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 AC135279.3-201ENST00000610945 1311 ntBASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 AC093503.3-201ENST00000624917 2352 ntBASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.29□□□□□ -0.28
SND1-IT1Q9HBX3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SND1-IT1Q9HBX3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms