Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 TNXA-203ENST00000507684 2038 ntBASIC18.95■□□□□ 0.62
PIF1Q9H611 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PIF1Q9H611 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
PIF1Q9H611 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PIF1Q9H611 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 RBM17P2-201ENST00000616397 1405 ntBASIC18.94■□□□□ 0.62
PIF1Q9H611 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.94■□□□□ 0.62
PIF1Q9H611 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
PIF1Q9H611 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PIF1Q9H611 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.94■□□□□ 0.62
PIF1Q9H611 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.94■□□□□ 0.62
PIF1Q9H611 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.94■□□□□ 0.62
PIF1Q9H611 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.94■□□□□ 0.62
PIF1Q9H611 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PIF1Q9H611 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.94■□□□□ 0.62
PIF1Q9H611 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.94■□□□□ 0.62
PIF1Q9H611 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PIF1Q9H611 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PIF1Q9H611 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.93■□□□□ 0.62
PIF1Q9H611 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PIF1Q9H611 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.93■□□□□ 0.62
PIF1Q9H611 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.93■□□□□ 0.62
PIF1Q9H611 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.93■□□□□ 0.62
PIF1Q9H611 CCDC92B-201ENST00000575506 885 ntBASIC18.93■□□□□ 0.62
PIF1Q9H611 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.93■□□□□ 0.62
PIF1Q9H611 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PIF1Q9H611 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.92■□□□□ 0.62
PIF1Q9H611 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.92■□□□□ 0.62
PIF1Q9H611 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
PIF1Q9H611 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.92■□□□□ 0.62
PIF1Q9H611 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PIF1Q9H611 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.92■□□□□ 0.62
PIF1Q9H611 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 FAM21FP-204ENST00000608637 956 ntBASIC18.92■□□□□ 0.62
PIF1Q9H611 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.92■□□□□ 0.62
PIF1Q9H611 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.92■□□□□ 0.62
PIF1Q9H611 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
PIF1Q9H611 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PIF1Q9H611 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PIF1Q9H611 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.92■□□□□ 0.62
PIF1Q9H611 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PIF1Q9H611 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PIF1Q9H611 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms