Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
HIPK3Q9H422 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIPK3Q9H422 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.81■■□□□ 1.08
HIPK3Q9H422 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.81■■□□□ 1.08
HIPK3Q9H422 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIPK3Q9H422 AC128688.1-201ENST00000487626 519 ntBASIC21.81■■□□□ 1.08
HIPK3Q9H422 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.81■■□□□ 1.08
HIPK3Q9H422 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
HIPK3Q9H422 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HIPK3Q9H422 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIPK3Q9H422 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIPK3Q9H422 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIPK3Q9H422 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
HIPK3Q9H422 AC244015.2-201ENST00000616358 1861 ntBASIC21.8■■□□□ 1.08
HIPK3Q9H422 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.8■■□□□ 1.08
HIPK3Q9H422 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.8■■□□□ 1.08
HIPK3Q9H422 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIPK3Q9H422 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIPK3Q9H422 AK4P3-201ENST00000418260 669 ntBASIC21.8■■□□□ 1.08
HIPK3Q9H422 CRYGFP-201ENST00000418459 633 ntBASIC21.8■■□□□ 1.08
HIPK3Q9H422 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.8■■□□□ 1.08
HIPK3Q9H422 AC097488.1-201ENST00000507834 756 ntBASIC21.8■■□□□ 1.08
HIPK3Q9H422 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.8■■□□□ 1.08
HIPK3Q9H422 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HIPK3Q9H422 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIPK3Q9H422 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIPK3Q9H422 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.8■■□□□ 1.08
HIPK3Q9H422 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIPK3Q9H422 AC121338.2-201ENST00000622535 1744 ntBASIC21.8■■□□□ 1.08
HIPK3Q9H422 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIPK3Q9H422 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIPK3Q9H422 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HIPK3Q9H422 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.79■■□□□ 1.08
HIPK3Q9H422 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HIPK3Q9H422 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HIPK3Q9H422 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
HIPK3Q9H422 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
HIPK3Q9H422 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.79■■□□□ 1.08
HIPK3Q9H422 AC011506.1-201ENST00000474329 610 ntBASIC21.79■■□□□ 1.08
HIPK3Q9H422 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
HIPK3Q9H422 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
HIPK3Q9H422 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.79■■□□□ 1.08
HIPK3Q9H422 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIPK3Q9H422 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.79■■□□□ 1.08
HIPK3Q9H422 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIPK3Q9H422 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIPK3Q9H422 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.79■■□□□ 1.08
HIPK3Q9H422 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIPK3Q9H422 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIPK3Q9H422 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
HIPK3Q9H422 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.78■■□□□ 1.08
HIPK3Q9H422 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
HIPK3Q9H422 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIPK3Q9H422 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.78■■□□□ 1.08
HIPK3Q9H422 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.78■■□□□ 1.08
HIPK3Q9H422 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIPK3Q9H422 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.78■■□□□ 1.08
HIPK3Q9H422 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.78■■□□□ 1.08
HIPK3Q9H422 UPK3BP1-201ENST00000428678 509 ntBASIC21.78■■□□□ 1.08
HIPK3Q9H422 BX664615.1-201ENST00000443558 458 ntBASIC21.78■■□□□ 1.08
HIPK3Q9H422 AC022616.7-201ENST00000525383 220 ntBASIC21.78■■□□□ 1.08
HIPK3Q9H422 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HIPK3Q9H422 LINC01238-205ENST00000567549 1107 ntBASIC21.78■■□□□ 1.08
HIPK3Q9H422 KRT8P17-201ENST00000453110 1448 ntBASIC21.78■■□□□ 1.08
HIPK3Q9H422 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.78■■□□□ 1.08
HIPK3Q9H422 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HIPK3Q9H422 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIPK3Q9H422 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIPK3Q9H422 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIPK3Q9H422 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.77■■□□□ 1.08
HIPK3Q9H422 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.77■■□□□ 1.08
HIPK3Q9H422 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.77■■□□□ 1.08
HIPK3Q9H422 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIPK3Q9H422 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
HIPK3Q9H422 AC091076.1-201ENST00000610741 619 ntBASIC21.77■■□□□ 1.08
HIPK3Q9H422 FAM87A-204ENST00000613235 858 ntBASIC21.77■■□□□ 1.08
HIPK3Q9H422 ECEL1P1-201ENST00000373592 1742 ntBASIC21.77■■□□□ 1.08
HIPK3Q9H422 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.77■■□□□ 1.08
HIPK3Q9H422 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.77■■□□□ 1.07
HIPK3Q9H422 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HIPK3Q9H422 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
HIPK3Q9H422 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIPK3Q9H422 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIPK3Q9H422 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIPK3Q9H422 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIPK3Q9H422 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIPK3Q9H422 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIPK3Q9H422 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HIPK3Q9H422 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HIPK3Q9H422 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.76■■□□□ 1.07
HIPK3Q9H422 AC004980.1-204ENST00000429707 299 ntBASIC21.76■■□□□ 1.07
HIPK3Q9H422 AC063952.2-201ENST00000498792 1227 ntBASIC21.76■■□□□ 1.07
HIPK3Q9H422 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.76■■□□□ 1.07
HIPK3Q9H422 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.76■■□□□ 1.07
HIPK3Q9H422 AL358472.4-201ENST00000633140 710 ntBASIC21.76■■□□□ 1.07
HIPK3Q9H422 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
HIPK3Q9H422 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIPK3Q9H422 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HIPK3Q9H422 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIPK3Q9H422 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms