Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE2OQ9C0C9 RNF152P1-201ENST00000397754 604 ntBASIC21.97■■□□□ 1.11
UBE2OQ9C0C9 AC091390.4-202ENST00000476426 537 ntBASIC21.97■■□□□ 1.11
UBE2OQ9C0C9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.97■■□□□ 1.11
UBE2OQ9C0C9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
UBE2OQ9C0C9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.97■■□□□ 1.11
UBE2OQ9C0C9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE2OQ9C0C9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE2OQ9C0C9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBE2OQ9C0C9 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.97■■□□□ 1.11
UBE2OQ9C0C9 AL121603.2-201ENST00000557373 2117 ntBASIC21.97■■□□□ 1.11
UBE2OQ9C0C9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBE2OQ9C0C9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 PCED1CP-201ENST00000419887 785 ntBASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBE2OQ9C0C9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
UBE2OQ9C0C9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
UBE2OQ9C0C9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 AC092647.4-201ENST00000457211 535 ntBASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 AC139887.4-201ENST00000607877 719 ntBASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 AL691432.3-201ENST00000621860 400 ntBASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UBE2OQ9C0C9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.94■■□□□ 1.1
UBE2OQ9C0C9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 HCG4P8-203ENST00000443049 980 ntBASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 FAM207BP-201ENST00000447172 505 ntBASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 FSCN1P1-201ENST00000568912 1481 ntBASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 AP005242.2-201ENST00000580065 1175 ntBASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 RNF165-205ENST00000588679 2904 ntBASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 FAM87A-204ENST00000613235 858 ntBASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
UBE2OQ9C0C9 AL031985.4-201ENST00000642138 673 ntBASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms