Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.69■■□□□ 1.38
UPF3BQ9BZI7 AC087289.5-201ENST00000586076 3175 ntBASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 AL589743.5-201ENST00000616611 1050 ntBASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.68■■□□□ 1.38
UPF3BQ9BZI7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 KRT8P20-201ENST00000423953 1409 ntBASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.67■■□□□ 1.38
UPF3BQ9BZI7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 AL512625.2-201ENST00000417533 625 ntBASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 C2orf69P4-201ENST00000565394 541 ntBASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF3BQ9BZI7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 RAP2CP1-201ENST00000605103 478 ntBASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF3BQ9BZI7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
UPF3BQ9BZI7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.64■■□□□ 1.38
UPF3BQ9BZI7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UPF3BQ9BZI7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.64■■□□□ 1.38
UPF3BQ9BZI7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
UPF3BQ9BZI7 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.64■■□□□ 1.38
UPF3BQ9BZI7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.64■■□□□ 1.37
UPF3BQ9BZI7 MIR663A-201ENST00000385250 93 ntBASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms