Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.91■□□□□ 0.94
SMOQ99835 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMOQ99835 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMOQ99835 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.91■□□□□ 0.94
SMOQ99835 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMOQ99835 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMOQ99835 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.91■□□□□ 0.94
SMOQ99835 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMOQ99835 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SMOQ99835 UBE2SP1-201ENST00000450587 669 ntBASIC20.91■□□□□ 0.94
SMOQ99835 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMOQ99835 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.91■□□□□ 0.94
SMOQ99835 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.91■□□□□ 0.94
SMOQ99835 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
SMOQ99835 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.91■□□□□ 0.94
SMOQ99835 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.91■□□□□ 0.94
SMOQ99835 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMOQ99835 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.91■□□□□ 0.94
SMOQ99835 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
SMOQ99835 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.91■□□□□ 0.94
SMOQ99835 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.91■□□□□ 0.94
SMOQ99835 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.91■□□□□ 0.94
SMOQ99835 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.91■□□□□ 0.94
SMOQ99835 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.91■□□□□ 0.94
SMOQ99835 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.91■□□□□ 0.94
SMOQ99835 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.91■□□□□ 0.94
SMOQ99835 AC018553.1-201ENST00000616682 1458 ntBASIC20.91■□□□□ 0.94
SMOQ99835 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.91■□□□□ 0.94
SMOQ99835 PHGDH-210ENST00000641115 1638 ntBASIC20.91■□□□□ 0.94
SMOQ99835 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMOQ99835 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.9■□□□□ 0.94
SMOQ99835 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SMOQ99835 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SMOQ99835 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SMOQ99835 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.9■□□□□ 0.94
SMOQ99835 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SMOQ99835 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SMOQ99835 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.9■□□□□ 0.94
SMOQ99835 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.9■□□□□ 0.94
SMOQ99835 AC110285.5-201ENST00000611501 352 ntBASIC20.9■□□□□ 0.94
SMOQ99835 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.9■□□□□ 0.94
SMOQ99835 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.9■□□□□ 0.94
SMOQ99835 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 AL691432.2-201ENST00000607222 2038 ntBASIC20.9■□□□□ 0.94
SMOQ99835 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.9■□□□□ 0.94
SMOQ99835 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.9■□□□□ 0.94
SMOQ99835 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMOQ99835 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SMOQ99835 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMOQ99835 TFP1-202ENST00000475455 1573 ntBASIC20.89■□□□□ 0.94
SMOQ99835 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMOQ99835 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SMOQ99835 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.89■□□□□ 0.93
SMOQ99835 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMOQ99835 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SMOQ99835 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMOQ99835 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.89■□□□□ 0.93
SMOQ99835 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.89■□□□□ 0.93
SMOQ99835 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMOQ99835 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.89■□□□□ 0.93
SMOQ99835 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.89■□□□□ 0.93
SMOQ99835 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMOQ99835 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SMOQ99835 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.89■□□□□ 0.93
SMOQ99835 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.89■□□□□ 0.93
SMOQ99835 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMOQ99835 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SMOQ99835 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMOQ99835 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.88■□□□□ 0.93
SMOQ99835 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMOQ99835 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMOQ99835 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMOQ99835 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.88■□□□□ 0.93
SMOQ99835 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SMOQ99835 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.88■□□□□ 0.93
SMOQ99835 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMOQ99835 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.88■□□□□ 0.93
SMOQ99835 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMOQ99835 PKD1P6-201ENST00000343738 4769 ntBASIC20.88■□□□□ 0.93
SMOQ99835 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMOQ99835 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.88■□□□□ 0.93
SMOQ99835 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMOQ99835 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMOQ99835 NBPF21P-201ENST00000425093 1451 ntBASIC20.88■□□□□ 0.93
SMOQ99835 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.88■□□□□ 0.93
SMOQ99835 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMOQ99835 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMOQ99835 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms