Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA3Q99618 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA3Q99618 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA3Q99618 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA3Q99618 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.8■□□□□ 0.92
CDCA3Q99618 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA3Q99618 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.8■□□□□ 0.92
CDCA3Q99618 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.8■□□□□ 0.92
CDCA3Q99618 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.8■□□□□ 0.92
CDCA3Q99618 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CDCA3Q99618 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.8■□□□□ 0.92
CDCA3Q99618 AL138966.2-201ENST00000621997 464 ntBASIC20.8■□□□□ 0.92
CDCA3Q99618 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA3Q99618 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.8■□□□□ 0.92
CDCA3Q99618 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA3Q99618 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.8■□□□□ 0.92
CDCA3Q99618 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCA3Q99618 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.79■□□□□ 0.92
CDCA3Q99618 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CDCA3Q99618 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA3Q99618 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA3Q99618 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA3Q99618 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.79■□□□□ 0.92
CDCA3Q99618 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA3Q99618 INGX-201ENST00000359239 846 ntBASIC20.79■□□□□ 0.92
CDCA3Q99618 SLC25A1P2-201ENST00000430693 912 ntBASIC20.79■□□□□ 0.92
CDCA3Q99618 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.79■□□□□ 0.92
CDCA3Q99618 AC091390.4-202ENST00000476426 537 ntBASIC20.79■□□□□ 0.92
CDCA3Q99618 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA3Q99618 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.79■□□□□ 0.92
CDCA3Q99618 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.79■□□□□ 0.92
CDCA3Q99618 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.79■□□□□ 0.92
CDCA3Q99618 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.79■□□□□ 0.92
CDCA3Q99618 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCA3Q99618 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA3Q99618 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA3Q99618 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA3Q99618 KRT16P6-202ENST00000425692 1426 ntBASIC20.78■□□□□ 0.92
CDCA3Q99618 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA3Q99618 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA3Q99618 Z98882.1-201ENST00000622160 2253 ntBASIC20.78■□□□□ 0.92
CDCA3Q99618 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA3Q99618 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA3Q99618 AC096733.2-201ENST00000609937 1394 ntBASIC20.78■□□□□ 0.92
CDCA3Q99618 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA3Q99618 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA3Q99618 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.78■□□□□ 0.92
CDCA3Q99618 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA3Q99618 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA3Q99618 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.78■□□□□ 0.92
CDCA3Q99618 AC011298.2-201ENST00000617989 482 ntBASIC20.78■□□□□ 0.92
CDCA3Q99618 AC010653.2-201ENST00000623505 997 ntBASIC20.78■□□□□ 0.92
CDCA3Q99618 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDCA3Q99618 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCA3Q99618 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.78■□□□□ 0.92
CDCA3Q99618 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCA3Q99618 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.78■□□□□ 0.92
CDCA3Q99618 RCC2P6-201ENST00000526625 1557 ntBASIC20.77■□□□□ 0.92
CDCA3Q99618 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA3Q99618 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA3Q99618 AL031133.1-201ENST00000406807 723 ntBASIC20.77■□□□□ 0.92
CDCA3Q99618 AC004951.3-201ENST00000418645 1148 ntBASIC20.77■□□□□ 0.92
CDCA3Q99618 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.77■□□□□ 0.92
CDCA3Q99618 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.77■□□□□ 0.92
CDCA3Q99618 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.77■□□□□ 0.92
CDCA3Q99618 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CDCA3Q99618 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.77■□□□□ 0.92
CDCA3Q99618 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.77■□□□□ 0.92
CDCA3Q99618 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDCA3Q99618 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDCA3Q99618 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.77■□□□□ 0.92
CDCA3Q99618 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CDCA3Q99618 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.77■□□□□ 0.92
CDCA3Q99618 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDCA3Q99618 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA3Q99618 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA3Q99618 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA3Q99618 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.76■□□□□ 0.91
CDCA3Q99618 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.76■□□□□ 0.91
CDCA3Q99618 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.76■□□□□ 0.91
CDCA3Q99618 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA3Q99618 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.76■□□□□ 0.91
CDCA3Q99618 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDCA3Q99618 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA3Q99618 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA3Q99618 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA3Q99618 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA3Q99618 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA3Q99618 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCA3Q99618 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.75■□□□□ 0.91
CDCA3Q99618 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA3Q99618 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDCA3Q99618 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.75■□□□□ 0.91
CDCA3Q99618 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.75■□□□□ 0.91
CDCA3Q99618 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDCA3Q99618 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA3Q99618 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDCA3Q99618 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA3Q99618 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDCA3Q99618 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms