Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCC1Q96S66 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CLCC1Q96S66 AP004607.4-201ENST00000530158 1459 ntBASIC16.68■□□□□ 0.26
CLCC1Q96S66 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.68■□□□□ 0.26
CLCC1Q96S66 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CLCC1Q96S66 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.68■□□□□ 0.26
CLCC1Q96S66 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.68■□□□□ 0.26
CLCC1Q96S66 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCC1Q96S66 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.68■□□□□ 0.26
CLCC1Q96S66 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.68■□□□□ 0.26
CLCC1Q96S66 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCC1Q96S66 AC007225.1-201ENST00000566331 1836 ntBASIC16.68■□□□□ 0.26
CLCC1Q96S66 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCC1Q96S66 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCC1Q96S66 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCC1Q96S66 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 AC005082.1-201ENST00000413042 2259 ntBASIC16.67■□□□□ 0.26
CLCC1Q96S66 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CLCC1Q96S66 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CLCC1Q96S66 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCC1Q96S66 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCC1Q96S66 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCC1Q96S66 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCC1Q96S66 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCC1Q96S66 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CLCC1Q96S66 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLCC1Q96S66 AC004854.2-201ENST00000608450 1441 ntBASIC16.67■□□□□ 0.26
CLCC1Q96S66 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCC1Q96S66 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCC1Q96S66 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.66■□□□□ 0.26
CLCC1Q96S66 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CLCC1Q96S66 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.66■□□□□ 0.26
CLCC1Q96S66 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLCC1Q96S66 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 TNXA-203ENST00000507684 2038 ntBASIC16.66■□□□□ 0.26
CLCC1Q96S66 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCC1Q96S66 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CLCC1Q96S66 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCC1Q96S66 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCC1Q96S66 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.66■□□□□ 0.26
CLCC1Q96S66 AP000974.1-201ENST00000623909 2387 ntBASIC16.66■□□□□ 0.26
CLCC1Q96S66 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCC1Q96S66 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCC1Q96S66 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
CLCC1Q96S66 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.65■□□□□ 0.26
CLCC1Q96S66 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 AC020907.5-201ENST00000624372 1936 ntBASIC16.65■□□□□ 0.26
CLCC1Q96S66 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.65■□□□□ 0.26
CLCC1Q96S66 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLCC1Q96S66 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms