Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL21A1Q96P44 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
COL21A1Q96P44 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
COL21A1Q96P44 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL21A1Q96P44 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL21A1Q96P44 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL21A1Q96P44 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL21A1Q96P44 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL21A1Q96P44 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL21A1Q96P44 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL21A1Q96P44 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL21A1Q96P44 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL21A1Q96P44 LSM12P1-201ENST00000411836 588 ntBASIC18.76■□□□□ 0.59
COL21A1Q96P44 MIPEPP3-201ENST00000412105 444 ntBASIC18.76■□□□□ 0.59
COL21A1Q96P44 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL21A1Q96P44 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL21A1Q96P44 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
COL21A1Q96P44 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL21A1Q96P44 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
COL21A1Q96P44 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.75■□□□□ 0.59
COL21A1Q96P44 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.75■□□□□ 0.59
COL21A1Q96P44 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL21A1Q96P44 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
COL21A1Q96P44 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL21A1Q96P44 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.75■□□□□ 0.59
COL21A1Q96P44 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL21A1Q96P44 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.75■□□□□ 0.59
COL21A1Q96P44 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
COL21A1Q96P44 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.75■□□□□ 0.59
COL21A1Q96P44 AC105020.6-201ENST00000621523 1217 ntBASIC18.75■□□□□ 0.59
COL21A1Q96P44 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.75■□□□□ 0.59
COL21A1Q96P44 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL21A1Q96P44 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL21A1Q96P44 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL21A1Q96P44 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL21A1Q96P44 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL21A1Q96P44 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL21A1Q96P44 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL21A1Q96P44 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.75■□□□□ 0.59
COL21A1Q96P44 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 KRT17P1-201ENST00000399211 1546 ntBASIC18.74■□□□□ 0.59
COL21A1Q96P44 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COL21A1Q96P44 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL21A1Q96P44 BX323043.1-201ENST00000641006 1765 ntBASIC18.73■□□□□ 0.59
COL21A1Q96P44 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
COL21A1Q96P44 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL21A1Q96P44 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL21A1Q96P44 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.73■□□□□ 0.59
COL21A1Q96P44 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.73■□□□□ 0.59
COL21A1Q96P44 AC018445.3-201ENST00000624177 1945 ntBASIC18.73■□□□□ 0.59
COL21A1Q96P44 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL21A1Q96P44 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL21A1Q96P44 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL21A1Q96P44 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL21A1Q96P44 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.73■□□□□ 0.59
COL21A1Q96P44 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COL21A1Q96P44 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
COL21A1Q96P44 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.73■□□□□ 0.59
COL21A1Q96P44 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.73■□□□□ 0.59
COL21A1Q96P44 MIR4758-201ENST00000577688 71 ntBASIC18.73■□□□□ 0.59
COL21A1Q96P44 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms