Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 BX005040.4-201ENST00000637145 1518 ntBASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 AIRN-201ENST00000601203 4374 ntBASIC18.35■□□□□ 0.53
COX4I2Q96KJ9 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 AP000997.3-201ENST00000623333 2250 ntBASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 TSPY6P-201ENST00000448518 926 ntBASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
COX4I2Q96KJ9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.33■□□□□ 0.53
COX4I2Q96KJ9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COX4I2Q96KJ9 PCDHB18P-201ENST00000524813 2368 ntBASIC18.33■□□□□ 0.53
COX4I2Q96KJ9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COX4I2Q96KJ9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COX4I2Q96KJ9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COX4I2Q96KJ9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COX4I2Q96KJ9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
COX4I2Q96KJ9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
COX4I2Q96KJ9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 AC005332.7-201ENST00000614046 2005 ntBASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COX4I2Q96KJ9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 AC093827.2-201ENST00000512654 315 ntBASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 MFSD11-216ENST00000590393 1141 ntBASIC18.32■□□□□ 0.52
COX4I2Q96KJ9 AL050303.2-201ENST00000619798 666 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms