Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 AC005829.2-201ENST00000571422 1056 ntBASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDLIM5Q96HC4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 AL158211.5-201ENST00000623583 2518 ntBASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 AC092666.2-201ENST00000613287 246 ntBASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDLIM5Q96HC4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 MYC-209ENST00000641252 345 ntBASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDLIM5Q96HC4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 AL390719.1-204ENST00000412397 1219 ntBASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM5Q96HC4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM5Q96HC4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms