Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 COX11P1-201ENST00000489116 835 ntBASIC23.41■■□□□ 1.34
CDCA5Q96FF9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.41■■□□□ 1.34
CDCA5Q96FF9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.41■■□□□ 1.34
CDCA5Q96FF9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDCA5Q96FF9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 PCED1CP-201ENST00000419887 785 ntBASIC23.4■■□□□ 1.34
CDCA5Q96FF9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 AC008040.2-201ENST00000461049 708 ntBASIC23.4■■□□□ 1.34
CDCA5Q96FF9 KRT18P16-201ENST00000510337 1294 ntBASIC23.4■■□□□ 1.34
CDCA5Q96FF9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDCA5Q96FF9 RCC2P6-201ENST00000526625 1557 ntBASIC23.4■■□□□ 1.34
CDCA5Q96FF9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.39■■□□□ 1.34
CDCA5Q96FF9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDCA5Q96FF9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.39■■□□□ 1.34
CDCA5Q96FF9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDCA5Q96FF9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
CDCA5Q96FF9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDCA5Q96FF9 YBX1P10-201ENST00000444752 975 ntBASIC23.39■■□□□ 1.33
CDCA5Q96FF9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.39■■□□□ 1.33
CDCA5Q96FF9 FAM86EP-206ENST00000510506 987 ntBASIC23.39■■□□□ 1.33
CDCA5Q96FF9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDCA5Q96FF9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDCA5Q96FF9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.39■■□□□ 1.33
CDCA5Q96FF9 AC011298.2-201ENST00000617989 482 ntBASIC23.39■■□□□ 1.33
CDCA5Q96FF9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.39■■□□□ 1.33
CDCA5Q96FF9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.39■■□□□ 1.33
CDCA5Q96FF9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.39■■□□□ 1.33
CDCA5Q96FF9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
CDCA5Q96FF9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
CDCA5Q96FF9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 AL121956.5-201ENST00000625261 221 ntBASIC23.38■■□□□ 1.33
CDCA5Q96FF9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
CDCA5Q96FF9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 TUBB8P6-201ENST00000436895 1288 ntBASIC23.37■■□□□ 1.33
CDCA5Q96FF9 MFAP1P1-201ENST00000442257 1255 ntBASIC23.37■■□□□ 1.33
CDCA5Q96FF9 CCR12P-201ENST00000446203 998 ntBASIC23.37■■□□□ 1.33
CDCA5Q96FF9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 AC093458.2-201ENST00000623150 629 ntBASIC23.37■■□□□ 1.33
CDCA5Q96FF9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 GUSBP5-202ENST00000510805 1989 ntBASIC23.37■■□□□ 1.33
CDCA5Q96FF9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CDCA5Q96FF9 AC116351.2-201ENST00000606540 1585 ntBASIC23.36■■□□□ 1.33
CDCA5Q96FF9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 AC026396.1-201ENST00000419388 421 ntBASIC23.36■■□□□ 1.33
CDCA5Q96FF9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CDCA5Q96FF9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms