Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.6■■□□□ 1.37
DDX11Q96FC9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
DDX11Q96FC9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.6■■□□□ 1.37
DDX11Q96FC9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX11Q96FC9 AC087633.2-202ENST00000565166 1439 ntBASIC23.59■■□□□ 1.37
DDX11Q96FC9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX11Q96FC9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX11Q96FC9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX11Q96FC9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX11Q96FC9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.59■■□□□ 1.37
DDX11Q96FC9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
DDX11Q96FC9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.59■■□□□ 1.37
DDX11Q96FC9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX11Q96FC9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
DDX11Q96FC9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX11Q96FC9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
DDX11Q96FC9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX11Q96FC9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX11Q96FC9 RPS2P4-201ENST00000476944 856 ntBASIC23.59■■□□□ 1.37
DDX11Q96FC9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.59■■□□□ 1.37
DDX11Q96FC9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
DDX11Q96FC9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX11Q96FC9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
DDX11Q96FC9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.59■■□□□ 1.37
DDX11Q96FC9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.58■■□□□ 1.37
DDX11Q96FC9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.58■■□□□ 1.37
DDX11Q96FC9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX11Q96FC9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
DDX11Q96FC9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.58■■□□□ 1.37
DDX11Q96FC9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
DDX11Q96FC9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
DDX11Q96FC9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
DDX11Q96FC9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
DDX11Q96FC9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.58■■□□□ 1.36
DDX11Q96FC9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.58■■□□□ 1.36
DDX11Q96FC9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
DDX11Q96FC9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.57■■□□□ 1.36
DDX11Q96FC9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX11Q96FC9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.57■■□□□ 1.36
DDX11Q96FC9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.57■■□□□ 1.36
DDX11Q96FC9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
DDX11Q96FC9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.57■■□□□ 1.36
DDX11Q96FC9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX11Q96FC9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX11Q96FC9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX11Q96FC9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.57■■□□□ 1.36
DDX11Q96FC9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
DDX11Q96FC9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
DDX11Q96FC9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.57■■□□□ 1.36
DDX11Q96FC9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.57■■□□□ 1.36
DDX11Q96FC9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
DDX11Q96FC9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
DDX11Q96FC9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.56■■□□□ 1.36
DDX11Q96FC9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DDX11Q96FC9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX11Q96FC9 KRT17P3-201ENST00000420566 1262 ntBASIC23.56■■□□□ 1.36
DDX11Q96FC9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.56■■□□□ 1.36
DDX11Q96FC9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DDX11Q96FC9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
DDX11Q96FC9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
DDX11Q96FC9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX11Q96FC9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX11Q96FC9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX11Q96FC9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX11Q96FC9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
DDX11Q96FC9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
DDX11Q96FC9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.55■■□□□ 1.36
DDX11Q96FC9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX11Q96FC9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.55■■□□□ 1.36
DDX11Q96FC9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX11Q96FC9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.55■■□□□ 1.36
DDX11Q96FC9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.55■■□□□ 1.36
DDX11Q96FC9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.55■■□□□ 1.36
DDX11Q96FC9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX11Q96FC9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX11Q96FC9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
DDX11Q96FC9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.55■■□□□ 1.36
DDX11Q96FC9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.55■■□□□ 1.36
DDX11Q96FC9 TCF3P1-201ENST00000423021 1937 ntBASIC23.55■■□□□ 1.36
DDX11Q96FC9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX11Q96FC9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX11Q96FC9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX11Q96FC9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
DDX11Q96FC9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX11Q96FC9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
DDX11Q96FC9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX11Q96FC9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
DDX11Q96FC9 UBE2SP1-201ENST00000450587 669 ntBASIC23.54■■□□□ 1.36
DDX11Q96FC9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX11Q96FC9 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.54■■□□□ 1.36
DDX11Q96FC9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX11Q96FC9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.54■■□□□ 1.36
DDX11Q96FC9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
DDX11Q96FC9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.54■■□□□ 1.36
DDX11Q96FC9 AC105020.6-201ENST00000621523 1217 ntBASIC23.54■■□□□ 1.36
DDX11Q96FC9 AL359736.2-201ENST00000621992 437 ntBASIC23.54■■□□□ 1.36
DDX11Q96FC9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.54■■□□□ 1.36
DDX11Q96FC9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
DDX11Q96FC9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.54■■□□□ 1.36
DDX11Q96FC9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms