Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 AC098818.2-201ENST00000564925 2320 ntBASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 AC093484.2-201ENST00000580996 2166 ntBASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXRED1Q96CU9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 AC009237.14-201ENST00000609975 1594 ntBASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 AL356652.1-201ENST00000615962 565 ntBASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 AP000974.1-201ENST00000623909 2387 ntBASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXRED1Q96CU9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
FOXRED1Q96CU9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms