Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBE2E3Q969T4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 SLC25A24-204ENST00000569674 2357 ntBASIC19.13■□□□□ 0.65
UBE2E3Q969T4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 AC090192.1-201ENST00000517740 490 ntBASIC19.13■□□□□ 0.65
UBE2E3Q969T4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
UBE2E3Q969T4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 AP001271.2-201ENST00000624018 1556 ntBASIC19.12■□□□□ 0.65
UBE2E3Q969T4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 AC073210.2-201ENST00000430369 194 ntBASIC19.12■□□□□ 0.65
UBE2E3Q969T4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBE2E3Q969T4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 AC009237.14-201ENST00000609975 1594 ntBASIC19.11■□□□□ 0.65
UBE2E3Q969T4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 AL138781.1-201ENST00000566567 1274 ntBASIC19.11■□□□□ 0.65
UBE2E3Q969T4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBE2E3Q969T4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.1■□□□□ 0.65
UBE2E3Q969T4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 AC005829.2-201ENST00000571422 1056 ntBASIC19.1■□□□□ 0.65
UBE2E3Q969T4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.1■□□□□ 0.65
UBE2E3Q969T4 AC133041.1-202ENST00000642053 222 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms