Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM54Q969K7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM54Q969K7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM54Q969K7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM54Q969K7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM54Q969K7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM54Q969K7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM54Q969K7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM54Q969K7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM54Q969K7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM54Q969K7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM54Q969K7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM54Q969K7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM54Q969K7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM54Q969K7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM54Q969K7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM54Q969K7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM54Q969K7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
TMEM54Q969K7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM54Q969K7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM54Q969K7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM54Q969K7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM54Q969K7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM54Q969K7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM54Q969K7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.53■□□□□ 0.4
TMEM54Q969K7 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.53■□□□□ 0.4
TMEM54Q969K7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.53■□□□□ 0.4
TMEM54Q969K7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM54Q969K7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TMEM54Q969K7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM54Q969K7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM54Q969K7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
TMEM54Q969K7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM54Q969K7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM54Q969K7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM54Q969K7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM54Q969K7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM54Q969K7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM54Q969K7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEM54Q969K7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEM54Q969K7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEM54Q969K7 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM54Q969K7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
TMEM54Q969K7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEM54Q969K7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.52■□□□□ 0.4
TMEM54Q969K7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM54Q969K7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM54Q969K7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM54Q969K7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM54Q969K7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM54Q969K7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM54Q969K7 AC116351.2-201ENST00000606540 1585 ntBASIC17.52■□□□□ 0.39
TMEM54Q969K7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM54Q969K7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM54Q969K7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TMEM54Q969K7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM54Q969K7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM54Q969K7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TMEM54Q969K7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM54Q969K7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM54Q969K7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TMEM54Q969K7 AFG3L1P-217ENST00000557444 2447 ntBASIC17.51■□□□□ 0.39
TMEM54Q969K7 AC018553.1-201ENST00000616682 1458 ntBASIC17.51■□□□□ 0.39
TMEM54Q969K7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TMEM54Q969K7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM54Q969K7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM54Q969K7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM54Q969K7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.51■□□□□ 0.39
TMEM54Q969K7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM54Q969K7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.51■□□□□ 0.39
TMEM54Q969K7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TMEM54Q969K7 RPS2P52-201ENST00000469610 820 ntBASIC17.51■□□□□ 0.39
TMEM54Q969K7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM54Q969K7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM54Q969K7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM54Q969K7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.51■□□□□ 0.39
TMEM54Q969K7 SOX15-203ENST00000570788 1093 ntBASIC17.51■□□□□ 0.39
TMEM54Q969K7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TMEM54Q969K7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM54Q969K7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM54Q969K7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM54Q969K7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM54Q969K7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM54Q969K7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.51■□□□□ 0.39
TMEM54Q969K7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM54Q969K7 AC125437.2-201ENST00000625180 2167 ntBASIC17.5■□□□□ 0.39
TMEM54Q969K7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM54Q969K7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms