Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NPIPB3Q92617 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NPIPB3Q92617 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NPIPB3Q92617 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPB3Q92617 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPB3Q92617 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPB3Q92617 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.67■□□□□ 0.1
NPIPB3Q92617 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPB3Q92617 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPB3Q92617 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.67■□□□□ 0.1
NPIPB3Q92617 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NPIPB3Q92617 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPB3Q92617 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPB3Q92617 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPB3Q92617 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPB3Q92617 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
NPIPB3Q92617 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NPIPB3Q92617 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPB3Q92617 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPB3Q92617 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.66■□□□□ 0.1
NPIPB3Q92617 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.66■□□□□ 0.1
NPIPB3Q92617 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.66■□□□□ 0.1
NPIPB3Q92617 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPB3Q92617 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPB3Q92617 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPB3Q92617 HCG11-201ENST00000411553 5696 ntBASIC15.66■□□□□ 0.1
NPIPB3Q92617 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPB3Q92617 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.66■□□□□ 0.1
NPIPB3Q92617 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPB3Q92617 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPB3Q92617 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPB3Q92617 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPB3Q92617 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NPIPB3Q92617 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.66■□□□□ 0.1
NPIPB3Q92617 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 TREX1-205ENST00000625293 1783 ntBASIC15.65■□□□□ 0.1
NPIPB3Q92617 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
NPIPB3Q92617 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPB3Q92617 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.65■□□□□ 0.1
NPIPB3Q92617 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.65■□□□□ 0.1
NPIPB3Q92617 AC016405.3-201ENST00000607710 860 ntBASIC15.65■□□□□ 0.1
NPIPB3Q92617 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
NPIPB3Q92617 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
NPIPB3Q92617 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.65■□□□□ 0.1
NPIPB3Q92617 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NPIPB3Q92617 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.64■□□□□ 0.09
NPIPB3Q92617 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB3Q92617 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.64■□□□□ 0.09
NPIPB3Q92617 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB3Q92617 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPB3Q92617 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB3Q92617 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.64■□□□□ 0.09
NPIPB3Q92617 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB3Q92617 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NPIPB3Q92617 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB3Q92617 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.64■□□□□ 0.09
NPIPB3Q92617 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB3Q92617 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
NPIPB3Q92617 AL162412.1-201ENST00000567129 965 ntBASIC15.64■□□□□ 0.09
NPIPB3Q92617 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
NPIPB3Q92617 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
NPIPB3Q92617 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB3Q92617 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB3Q92617 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB3Q92617 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NPIPB3Q92617 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.64■□□□□ 0.09
NPIPB3Q92617 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
NPIPB3Q92617 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.64■□□□□ 0.09
NPIPB3Q92617 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB3Q92617 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB3Q92617 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB3Q92617 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.63■□□□□ 0.09
NPIPB3Q92617 AC093484.2-201ENST00000580996 2166 ntBASIC15.63■□□□□ 0.09
NPIPB3Q92617 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB3Q92617 AC005332.7-201ENST00000614046 2005 ntBASIC15.63■□□□□ 0.09
NPIPB3Q92617 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.63■□□□□ 0.09
NPIPB3Q92617 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB3Q92617 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB3Q92617 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB3Q92617 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPB3Q92617 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB3Q92617 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB3Q92617 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.63■□□□□ 0.09
NPIPB3Q92617 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
NPIPB3Q92617 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NPIPB3Q92617 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms