Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
RAB40AQ8WXH6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 ID1-201ENST00000376105 1233 ntBASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 SLC7A5P1-201ENST00000568957 537 ntBASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 AC231657.2-201ENST00000624556 255 ntBASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40AQ8WXH6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 POU5F1P4-201ENST00000413175 1085 ntBASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 AC061975.6-201ENST00000579045 1553 ntBASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAB40AQ8WXH6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 AC093484.2-201ENST00000580996 2166 ntBASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 AC006970.2-201ENST00000450065 779 ntBASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 DUX4L16-201ENST00000555130 1264 ntBASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB40AQ8WXH6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 AC007322.1-201ENST00000426983 750 ntBASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 SLC7A5P2-201ENST00000553010 536 ntBASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB40AQ8WXH6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms