Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 KRT16P5-201ENST00000455284 522 ntBASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 AL355075.4-201ENST00000554988 638 ntBASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 LINC01023-201ENST00000606054 436 ntBASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 HTR7P1-201ENST00000538670 1336 ntBASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHKBP1Q8TBC3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 RNF165-205ENST00000588679 2904 ntBASIC20.91■□□□□ 0.94
SHKBP1Q8TBC3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 PLK5-205ENST00000642079 1969 ntBASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 AF186192.3-201ENST00000583427 947 ntBASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.9■□□□□ 0.94
SHKBP1Q8TBC3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SHKBP1Q8TBC3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SHKBP1Q8TBC3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.89■□□□□ 0.94
SHKBP1Q8TBC3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SHKBP1Q8TBC3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHKBP1Q8TBC3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SHKBP1Q8TBC3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.89■□□□□ 0.93
SHKBP1Q8TBC3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SHKBP1Q8TBC3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.89■□□□□ 0.93
SHKBP1Q8TBC3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.89■□□□□ 0.93
SHKBP1Q8TBC3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHKBP1Q8TBC3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHKBP1Q8TBC3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
SHKBP1Q8TBC3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SHKBP1Q8TBC3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHKBP1Q8TBC3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
SHKBP1Q8TBC3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 HLA-G-202ENST00000376815 851 ntBASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 HLA-G-203ENST00000376818 1127 ntBASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 AC087499.1-201ENST00000418141 1075 ntBASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 AC026471.5-201ENST00000615068 467 ntBASIC20.88■□□□□ 0.93
SHKBP1Q8TBC3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms