Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SVIPQ8NHG7 HYMAI-201ENST00000635591 3347 ntBASIC12.57□□□□□ -0.4
SVIPQ8NHG7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
SVIPQ8NHG7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.57□□□□□ -0.4
SVIPQ8NHG7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SVIPQ8NHG7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC12.57□□□□□ -0.4
SVIPQ8NHG7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SVIPQ8NHG7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SVIPQ8NHG7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 AL022476.1-201ENST00000443063 2083 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 UGT1A8-201ENST00000373450 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SVIPQ8NHG7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 C8orf17-202ENST00000625034 2775 ntBASIC12.54□□□□□ -0.4
SVIPQ8NHG7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 AC005229.4-201ENST00000610085 2198 ntBASIC12.54□□□□□ -0.4
SVIPQ8NHG7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 H19-210ENST00000439725 1929 ntTSL 2 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms