Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AP002982.1-201ENST00000492365 877 ntBASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ZNF248Q8NDW4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 TERF1P1-201ENST00000311003 1181 ntBASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF248Q8NDW4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF248Q8NDW4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF248Q8NDW4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF248Q8NDW4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF248Q8NDW4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
ZNF248Q8NDW4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF248Q8NDW4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
ZNF248Q8NDW4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF248Q8NDW4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF248Q8NDW4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF248Q8NDW4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF248Q8NDW4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF248Q8NDW4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF248Q8NDW4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF248Q8NDW4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 AC087388.1-201ENST00000571370 1112 ntBASIC19■□□□□ 0.63
ZNF248Q8NDW4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF248Q8NDW4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF248Q8NDW4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF248Q8NDW4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF248Q8NDW4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF248Q8NDW4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF248Q8NDW4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
ZNF248Q8NDW4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 DUX4L26-201ENST00000489078 1255 ntBASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 NTF6B-201ENST00000591913 560 ntBASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 AL121906.2-201ENST00000621597 723 ntBASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF248Q8NDW4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF248Q8NDW4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF248Q8NDW4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ZNF248Q8NDW4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms