Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF439Q8NDP4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF439Q8NDP4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF439Q8NDP4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF439Q8NDP4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF439Q8NDP4 AC133552.2-202ENST00000575694 574 ntBASIC16.47■□□□□ 0.23
ZNF439Q8NDP4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.47■□□□□ 0.23
ZNF439Q8NDP4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ZNF439Q8NDP4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ZNF439Q8NDP4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.47■□□□□ 0.23
ZNF439Q8NDP4 AL050303.2-201ENST00000619798 666 ntBASIC16.47■□□□□ 0.23
ZNF439Q8NDP4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF439Q8NDP4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF439Q8NDP4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 AC026185.1-201ENST00000445748 174 ntBASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF439Q8NDP4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 AL589743.5-201ENST00000616611 1050 ntBASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 KRT17P1-201ENST00000399211 1546 ntBASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
ZNF439Q8NDP4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 MIR663A-201ENST00000385250 93 ntBASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.43■□□□□ 0.22
ZNF439Q8NDP4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms