Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 AC008040.2-201ENST00000461049 708 ntBASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 AC128688.1-201ENST00000487626 519 ntBASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 AC091076.1-201ENST00000610741 619 ntBASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.34■■□□□ 1.65
LINC00116Q8NCU8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
LINC00116Q8NCU8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LINC00116Q8NCU8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LINC00116Q8NCU8 AL031133.1-201ENST00000406807 723 ntBASIC25.33■■□□□ 1.65
LINC00116Q8NCU8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
LINC00116Q8NCU8 AC116351.2-201ENST00000606540 1585 ntBASIC25.33■■□□□ 1.65
LINC00116Q8NCU8 AC139887.4-201ENST00000607877 719 ntBASIC25.33■■□□□ 1.65
LINC00116Q8NCU8 AL138966.2-201ENST00000621997 464 ntBASIC25.33■■□□□ 1.65
LINC00116Q8NCU8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC25.33■■□□□ 1.64
LINC00116Q8NCU8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.64
LINC00116Q8NCU8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 TFP1-202ENST00000475455 1573 ntBASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 FAM8A6P-201ENST00000407496 1135 ntBASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 KRT18P16-201ENST00000510337 1294 ntBASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 AC130371.2-201ENST00000619443 611 ntBASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.32■■□□□ 1.64
LINC00116Q8NCU8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 COPE-203ENST00000351079 907 ntTSL 2 BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 SLC25A1P4-201ENST00000567977 778 ntBASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 AL121894.2-201ENST00000602977 491 ntBASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINC00116Q8NCU8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 AP000692.2-201ENST00000608391 879 ntBASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 AC131212.4-201ENST00000623606 975 ntBASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
LINC00116Q8NCU8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 HMGA1P5-201ENST00000412453 271 ntBASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 YBX1P10-201ENST00000444752 975 ntBASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 RCC2P6-201ENST00000526625 1557 ntBASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.29■■□□□ 1.64
LINC00116Q8NCU8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.28■■□□□ 1.64
LINC00116Q8NCU8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LINC00116Q8NCU8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
LINC00116Q8NCU8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC25.28■■□□□ 1.64
LINC00116Q8NCU8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms