Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.5■□□□□ 0.55
CDRT4Q8N9R6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDRT4Q8N9R6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CDRT4Q8N9R6 AFG3L1P-217ENST00000557444 2447 ntBASIC18.5■□□□□ 0.55
CDRT4Q8N9R6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDRT4Q8N9R6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 AL138781.1-201ENST00000566567 1274 ntBASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 AC005829.2-201ENST00000571422 1056 ntBASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 AC104771.1-201ENST00000603335 964 ntBASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 AC009237.14-201ENST00000609975 1594 ntBASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.49■□□□□ 0.55
CDRT4Q8N9R6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 AP001271.2-201ENST00000624018 1556 ntBASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 AC133041.1-202ENST00000642053 222 ntBASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 PHGDH-210ENST00000641115 1638 ntBASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CDRT4Q8N9R6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 AC142086.2-201ENST00000569753 217 ntBASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDRT4Q8N9R6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 AC069152.1-201ENST00000438030 544 ntBASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDRT4Q8N9R6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms