Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 AC087289.5-201ENST00000586076 3175 ntBASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 AC009237.14-201ENST00000609975 1594 ntBASIC18.21■□□□□ 0.51
LSMEM1Q8N8F7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
LSMEM1Q8N8F7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LSMEM1Q8N8F7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 AL050303.2-201ENST00000619798 666 ntBASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.2■□□□□ 0.5
LSMEM1Q8N8F7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 AF201337.1-201ENST00000520239 748 ntBASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LSMEM1Q8N8F7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 LSM12P1-201ENST00000411836 588 ntBASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 MKRN4P-201ENST00000444706 1521 ntBASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LSMEM1Q8N8F7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 AC105036.2-201ENST00000569468 176 ntBASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.17■□□□□ 0.5
LSMEM1Q8N8F7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LSMEM1Q8N8F7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms