Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 CR392000.1-201ENST00000624770 1228 ntBASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SYNPOQ8N3V7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 AC005229.4-201ENST00000610085 2198 ntBASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 AL137013.1-201ENST00000432946 1228 ntBASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.25■□□□□ 0.83
SYNPOQ8N3V7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 KRT8P20-201ENST00000423953 1409 ntBASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SYNPOQ8N3V7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.23■□□□□ 0.83
SYNPOQ8N3V7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYNPOQ8N3V7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SYNPOQ8N3V7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYNPOQ8N3V7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYNPOQ8N3V7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SYNPOQ8N3V7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SYNPOQ8N3V7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.23■□□□□ 0.83
SYNPOQ8N3V7 AC010947.1-201ENST00000623454 693 ntBASIC20.23■□□□□ 0.83
SYNPOQ8N3V7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.23■□□□□ 0.83
SYNPOQ8N3V7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.23■□□□□ 0.83
SYNPOQ8N3V7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SYNPOQ8N3V7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 AC073508.3-201ENST00000619697 1419 ntBASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 TERF1P1-201ENST00000311003 1181 ntBASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 Z98882.1-201ENST00000622160 2253 ntBASIC20.22■□□□□ 0.83
SYNPOQ8N3V7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 AL031985.4-201ENST00000642138 673 ntBASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 CYP2D8P-201ENST00000433633 1490 ntBASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.21■□□□□ 0.83
SYNPOQ8N3V7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms