Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC146Q8IYE0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC146Q8IYE0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC146Q8IYE0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CCDC146Q8IYE0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC146Q8IYE0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC146Q8IYE0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
CCDC146Q8IYE0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC146Q8IYE0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC146Q8IYE0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC146Q8IYE0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC146Q8IYE0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CCDC146Q8IYE0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
CCDC146Q8IYE0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.39■■□□□ 1.82
CCDC146Q8IYE0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC26.39■■□□□ 1.82
CCDC146Q8IYE0 AC120498.8-201ENST00000614275 531 ntBASIC26.39■■□□□ 1.82
CCDC146Q8IYE0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCDC146Q8IYE0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCDC146Q8IYE0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CCDC146Q8IYE0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CCDC146Q8IYE0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 KRT16P6-202ENST00000425692 1426 ntBASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC146Q8IYE0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 LBX2-AS1-202ENST00000603175 2083 ntBASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.37■■□□□ 1.81
CCDC146Q8IYE0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CCDC146Q8IYE0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 POU5F1P3-201ENST00000428824 1078 ntBASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC146Q8IYE0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 ABHD17AP1-201ENST00000358206 933 ntBASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 AC006058.3-201ENST00000606217 1069 ntBASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC146Q8IYE0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC146Q8IYE0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC146Q8IYE0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms