Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM1Q86UE6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM1Q86UE6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM1Q86UE6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM1Q86UE6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.25■□□□□ 0.35
LRRTM1Q86UE6 AC138932.1-201ENST00000534164 6830 ntBASIC17.25■□□□□ 0.35
LRRTM1Q86UE6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRRTM1Q86UE6 AL032819.2-201ENST00000624543 2162 ntBASIC17.25■□□□□ 0.35
LRRTM1Q86UE6 PTBP1P-201ENST00000554374 1601 ntBASIC17.25■□□□□ 0.35
LRRTM1Q86UE6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.24■□□□□ 0.35
LRRTM1Q86UE6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LRRTM1Q86UE6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRTM1Q86UE6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRRTM1Q86UE6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms