Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF546Q86UE3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF546Q86UE3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF546Q86UE3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZNF546Q86UE3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ZNF546Q86UE3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 KRT16P3-201ENST00000439127 1283 ntBASIC16.51■□□□□ 0.23
ZNF546Q86UE3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ZNF546Q86UE3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 SRD5A1P1-201ENST00000442297 786 ntBASIC16.5■□□□□ 0.23
ZNF546Q86UE3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 AL356740.2-201ENST00000601559 647 ntBASIC16.5■□□□□ 0.23
ZNF546Q86UE3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 AP000997.3-201ENST00000623333 2250 ntBASIC16.5■□□□□ 0.23
ZNF546Q86UE3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ZNF546Q86UE3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 AC135050.7-201ENST00000624508 2218 ntBASIC16.49■□□□□ 0.23
ZNF546Q86UE3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 AC009113.1-201ENST00000570267 2443 ntBASIC16.49■□□□□ 0.23
ZNF546Q86UE3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ZNF546Q86UE3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms