Protein–RNA interactions for Protein: Q7Z3S7

CACNA2D4, Voltage-dependent calcium channel subunit alpha-2/delta-4, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4Q7Z3S7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.77■■□□□ 1.08
CACNA2D4Q7Z3S7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA2D4Q7Z3S7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CACNA2D4Q7Z3S7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA2D4Q7Z3S7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA2D4Q7Z3S7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CACNA2D4Q7Z3S7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA2D4Q7Z3S7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CACNA2D4Q7Z3S7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
CACNA2D4Q7Z3S7 CYP21A1P-202ENST00000354927 1481 ntBASIC21.77■■□□□ 1.07
CACNA2D4Q7Z3S7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.77■■□□□ 1.07
CACNA2D4Q7Z3S7 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 AL138781.1-201ENST00000566567 1274 ntBASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.76■■□□□ 1.07
CACNA2D4Q7Z3S7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 AC125437.2-201ENST00000625180 2167 ntBASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 AC013268.1-206ENST00000638368 961 ntBASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 AC112229.1-201ENST00000639295 961 ntBASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.75■■□□□ 1.07
CACNA2D4Q7Z3S7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CACNA2D4Q7Z3S7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 TMEM179-206ENST00000616017 1645 ntBASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 AL158211.5-201ENST00000623583 2518 ntBASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 AC138932.1-201ENST00000534164 6830 ntBASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 AL162412.1-201ENST00000567129 965 ntBASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 MIR4651-201ENST00000582622 73 ntBASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 AC016405.3-201ENST00000607710 860 ntBASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 RNF165-205ENST00000588679 2904 ntBASIC21.73■■□□□ 1.07
CACNA2D4Q7Z3S7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA2D4Q7Z3S7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CACNA2D4Q7Z3S7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CACNA2D4Q7Z3S7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.72■■□□□ 1.07
CACNA2D4Q7Z3S7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CACNA2D4Q7Z3S7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
CACNA2D4Q7Z3S7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.72■■□□□ 1.07
CACNA2D4Q7Z3S7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.72■■□□□ 1.07
CACNA2D4Q7Z3S7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms