Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP1BQ7LBR1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 TSPY20P-201ENST00000450910 630 ntBASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMP1BQ7LBR1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP1BQ7LBR1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP1BQ7LBR1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP1BQ7LBR1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP1BQ7LBR1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP1BQ7LBR1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHMP1BQ7LBR1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHMP1BQ7LBR1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 AC027702.1-201ENST00000563810 1770 ntBASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 C2orf69P4-201ENST00000565394 541 ntBASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHMP1BQ7LBR1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms