Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00173Q6ZV60 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
LINC00173Q6ZV60 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
LINC00173Q6ZV60 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
LINC00173Q6ZV60 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00173Q6ZV60 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00173Q6ZV60 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 MIR6724-1-201ENST00000616420 92 ntBASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 MIR6724-2-201ENST00000616483 92 ntBASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 MIR6724-4-201ENST00000617390 92 ntBASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 MIR6724-3-201ENST00000622482 92 ntBASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00173Q6ZV60 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00173Q6ZV60 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00173Q6ZV60 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00173Q6ZV60 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00173Q6ZV60 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms