Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 TMEM179-206ENST00000616017 1645 ntBASIC18.09■□□□□ 0.49
NIPAL3Q6P499 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 AC083906.2-201ENST00000511578 360 ntBASIC18.09■□□□□ 0.49
NIPAL3Q6P499 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 CYP2T3P-201ENST00000601990 817 ntBASIC18.09■□□□□ 0.49
NIPAL3Q6P499 AL356652.1-201ENST00000615962 565 ntBASIC18.09■□□□□ 0.49
NIPAL3Q6P499 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NIPAL3Q6P499 BX119927.1-201ENST00000636596 1552 ntBASIC18.08■□□□□ 0.49
NIPAL3Q6P499 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.08■□□□□ 0.49
NIPAL3Q6P499 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
NIPAL3Q6P499 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.08■□□□□ 0.49
NIPAL3Q6P499 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NIPAL3Q6P499 AC018445.3-201ENST00000624177 1945 ntBASIC18.08■□□□□ 0.49
NIPAL3Q6P499 KRT18P68-201ENST00000392293 1000 ntBASIC18.08■□□□□ 0.48
NIPAL3Q6P499 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NIPAL3Q6P499 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.08■□□□□ 0.48
NIPAL3Q6P499 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.08■□□□□ 0.48
NIPAL3Q6P499 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NIPAL3Q6P499 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NIPAL3Q6P499 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.08■□□□□ 0.48
NIPAL3Q6P499 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NIPAL3Q6P499 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
NIPAL3Q6P499 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NIPAL3Q6P499 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
NIPAL3Q6P499 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NIPAL3Q6P499 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 GPX1P1-201ENST00000388829 606 ntBASIC18.07■□□□□ 0.48
NIPAL3Q6P499 NCF1B-203ENST00000435988 1254 ntBASIC18.07■□□□□ 0.48
NIPAL3Q6P499 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.07■□□□□ 0.48
NIPAL3Q6P499 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NIPAL3Q6P499 BX323043.1-201ENST00000641006 1765 ntBASIC18.07■□□□□ 0.48
NIPAL3Q6P499 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 SLC29A4P1-201ENST00000398760 971 ntBASIC18.06■□□□□ 0.48
NIPAL3Q6P499 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NIPAL3Q6P499 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms