Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FAM53AQ6NSI3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FAM53AQ6NSI3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 AC116562.4-201ENST00000641316 2276 ntBASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 AC026185.1-201ENST00000445748 174 ntBASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 AC105036.2-201ENST00000569468 176 ntBASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM53AQ6NSI3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM53AQ6NSI3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.46■□□□□ 0.22
FAM53AQ6NSI3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.46■□□□□ 0.22
FAM53AQ6NSI3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 KRT8P17-201ENST00000453110 1448 ntBASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.45■□□□□ 0.22
FAM53AQ6NSI3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms