Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 MIR4651-201ENST00000582622 73 ntBASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 AIRN-201ENST00000601203 4374 ntBASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R3AQ6IN85 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PPP4R3AQ6IN85 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PPP4R3AQ6IN85 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 ESRRAP1-201ENST00000400596 1257 ntBASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.58■■□□□ 1.21
PPP4R3AQ6IN85 AL691432.2-201ENST00000607222 2038 ntBASIC22.58■■□□□ 1.2
PPP4R3AQ6IN85 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PPP4R3AQ6IN85 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
PPP4R3AQ6IN85 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.2
PPP4R3AQ6IN85 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
PPP4R3AQ6IN85 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.58■■□□□ 1.2
PPP4R3AQ6IN85 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 POM121L13P-201ENST00000422362 380 ntBASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PPP4R3AQ6IN85 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms