Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 AC131212.4-201ENST00000623606 975 ntBASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LYSMD4Q5XG99 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.58■□□□□ 0.73
LYSMD4Q5XG99 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.58■□□□□ 0.73
LYSMD4Q5XG99 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LYSMD4Q5XG99 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 YBX1P10-201ENST00000444752 975 ntBASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 AC011506.1-201ENST00000474329 610 ntBASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 LINC01238-205ENST00000567549 1107 ntBASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 AL024507.2-201ENST00000606070 2574 ntBASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LYSMD4Q5XG99 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 AK4P3-201ENST00000418260 669 ntBASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 AC004980.1-204ENST00000429707 299 ntBASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 BX664615.1-201ENST00000443558 458 ntBASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.57■□□□□ 0.72
LYSMD4Q5XG99 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 TUBB8P6-201ENST00000436895 1288 ntBASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 AC116351.2-201ENST00000606540 1585 ntBASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LYSMD4Q5XG99 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 FAM87A-204ENST00000613235 858 ntBASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LYSMD4Q5XG99 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LYSMD4Q5XG99 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms