Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.78■□□□□ 0.76
LDLRAP1Q5SW96 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 AC026366.1-201ENST00000488803 879 ntBASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 AC008687.6-201ENST00000596318 630 ntBASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.77■□□□□ 0.76
LDLRAP1Q5SW96 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LDLRAP1Q5SW96 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
LDLRAP1Q5SW96 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDLRAP1Q5SW96 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 BX119927.1-201ENST00000636596 1552 ntBASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 ESRRAP1-201ENST00000400596 1257 ntBASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 AC120498.8-201ENST00000614275 531 ntBASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDLRAP1Q5SW96 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 MIR4651-201ENST00000582622 73 ntBASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 AC008403.3-201ENST00000598924 454 ntBASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.74■□□□□ 0.75
LDLRAP1Q5SW96 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms