Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 AC133041.1-202ENST00000642053 222 ntBASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.51■■□□□ 1.03
CBWD3Q5JTY5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 AC009237.14-201ENST00000609975 1594 ntBASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 ID1-201ENST00000376105 1233 ntBASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CBWD3Q5JTY5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 PHGDH-210ENST00000641115 1638 ntBASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 AC006557.6-201ENST00000623071 864 ntBASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.49■■□□□ 1.03
CBWD3Q5JTY5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 HLA-B-256ENST00000639848 1089 ntBASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CBWD3Q5JTY5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.47■■□□□ 1.03
CBWD3Q5JTY5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBWD3Q5JTY5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBWD3Q5JTY5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBWD3Q5JTY5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBWD3Q5JTY5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CBWD3Q5JTY5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.47■■□□□ 1.03
CBWD3Q5JTY5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBWD3Q5JTY5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CBWD3Q5JTY5 AC092368.3-202ENST00000574180 1591 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms